rstoolbox.io.
parse_rosetta_contacts
(filename)¶Read a residue contact file as generated by ContactMapMover.
Returns three objects:
order | type | content |
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1 | DataFrame |
matrix with boolean True in
contacts; Rosetta numbering (no seqID ) |
2 | list() of str |
list of 3-letter code amino acids for row axis |
3 | list() of str |
list of 3-letter code amino acids for column axis |
In a regular run for the ContactMapMover without selectors, list 2 and 3 will be identical.
Parameters: | filename (str) – File containing the Rosetta fragments. |
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