rstoolbox.utils.
baseline
(minimize=False)¶RosettaScript to calculate DSSP secondary structure and phi-psi angles.
Parameters: | minimize (bool) – If True , apply minimization before
evaluating the structure. |
---|---|
Returns: | str |
See also
Example
In [1]: from rstoolbox.utils import baseline
...: print(baseline())
...:
<ROSETTASCRIPTS>
<MOVERS>
<WriteSSEMover dssp="1" name="w" write_phipsi="true" />
<MinMover name="m" bb="true" chi="true" tolerance=".1" />
</MOVERS>
<FILTERS>
<CavityVolume name="cavity" confidence="0" />
<PackStat name="pack" confidence="0" />
<AverageDegree name="avdegree" confidence="0" />
</FILTERS>
<PROTOCOLS>
<Add mover="w" />
<Add filter="cavity" />
<Add filter="pack" />
<Add filter="avdegree" />
</PROTOCOLS>
</ROSETTASCRIPTS>